Three Dimensional Pseudo-Spectral Compressible Magnetohydrodynamic GPU Code for Astrophysical Plasma Simulation

This paper presents the benchmarking and scaling studies of a GPU accelerated three dimensional compressible magnetohydrodynamic code. The code is developed keeping an eye to explain the large and intermediate scale magnetic field generation is cosmos as well as in nuclear fusion reactors in the light of the theory given by Eugene Newman Parker. The spatial derivatives of the code are pseudo-spectral method based and the time solvers are explicit. GPU acceleration is achieved with minimal code changes through OpenACC parallelization and use of NVIDIA CUDA Fast Fourier Transform library (cuFFT). NVIDIAs unified memory is leveraged to enable over-subscription of the GPU device memory for seamless out-of-core processing of large grids. Our experimental results indicate that the GPU accelerated code is able to achieve upto two orders of magnitude speedup over a corresponding OpenMP parallel, FFTW library based code, on a NVIDIA Tesla P100 GPU. For large grids that require out-of-core processing on the GPU, we see a 7x speedup over the OpenMP, FFTW based code, on the Tesla P100 GPU. We also present performance analysis of the GPU accelerated code on different GPU architectures - Kepler, Pascal and Volta

To study the association of high sensitivity C-reactive protein with metabolic syndrome

Background: Metabolic Syndrome is a constellation of dyslipidemia (elevated triglycerides, low high-density lipoproteins (HDL)), elevation of arterial blood pressure (BP), dysregulated glucose homeostasis, and increased abdominal obesity.Methods: We studied the association of high sensitivity C-reactive protein with metabolic syndrome by case-control method in our tertiary care hospital in West U.P.Results: The mean age of cases and controls was 52.6 ± 7.7 and 51.4±7.0 years, respectively. There were 25 (50%) male and 25 (50%) female in case groups, and 27 (54%) males and 23 (46%) females in control group. Our analysis revelaed that there was a significant association between hs-CRP and the central obesity when compared in case-control group (3.57 vs 0.96 mg/L) (p value <0.001). There was no significant association between hs-CRP and high triglycerides, hypertension, diabetes, and reduced high density lipoprotein cholesterol.Conclusions: Raised hsCRP level can be considered as a surrogate marker of chronic inflammation in patients with metabolic syndrome

THE PATHOGENESIS AND INDIGENOUS MANAGEMENT OF ASRGDARA W.S.R TO MENORRHAGIA

Menorrhagia is a very common complaint among females in recent years. The World Health Organization reports that 18 million women aged 30-55 years perceive their menstrual bleeding to be exorbitant. Reports show that only 10% of these women experience blood loss severe enough to cause anaemia or be clinically defined as menorrhagia.Asrgdara means heavy vaginal bleeding during or before or after menstrual period. Though the menorrhagia is not directly described in any textbook of Ayurveda but it is quite similar to Asrgdara having uterine bleeding other than menstrual bleeding among other causes. Menorrhagia is not new for Ayurveda which is described under the heading of the Asrgdara. The main clinical feature of both menorrhagia and Asrgdara is uterine bleeding along with its other complications. The main types of Asrgdara are Vataja, Pittaj, Kaphaj, and Sannipataj Trividhpariksha also helps to diagnose the disease by means of Darshan (inspection), Sparshan (palpitation) and Prashan (questioning). There are so many generic and patent drug available in Ayurveda like Raktapradarharyog, Ashokaristha, Pradarantakras, Pradrariras may helpful to stop the bleeding and also able to cure the complications of Asrgdara..Thus Ayurvedic treatment may have strong ability of breaking down the pathogenesis of Asrgdara and its management also

Upregulation of miR-23a∼27a∼24-2 Cluster Induces Caspase-Dependent and -Independent Apoptosis in Human Embryonic Kidney Cells

miRNAs have emerged as important players in the regulation of gene expression and their deregulation is a common feature in a variety of diseases, especially cancer. Currently, many efforts are focused on studying miRNA expression patterns, as well as miRNA target validation. Here, we show that the over expression of miR-23a∼27a∼24-2 cluster in HEK293T cells induces apoptosis by caspase-dependent as well as caspase-independent pathway as proved by the annexin assay, caspase activation, release of cytochrome-c and AIF (apoptosis inducing factor) from mitochondria. Furthermore, the over expressed cluster modulates the expression of a number of genes involved in apoptosis including FADD (Fas Associated protein with Death Domain). Bioinformatically, FADD is predicted to be the target of hsa-miR-27a and interestingly, FADD protein was found to be up regulated consistent with very less expression of hsa-miR-27a in HEK293T cells. This effect was direct, as hsa-miR-27a negatively regulated the expression of FADD 3′UTR based reporter construct. Moreover, we also showed that over expression of miR-23a∼27a∼24-2 sensitized HEK293T cells to TNF-α cytotoxicity. Taken together, our study demonstrates that enhanced TNF-α induced apoptosis in HEK293T cells by over expression of miR-23a∼27a∼24-2 cluster provides new insights in the development of novel therapeutics for cancer

Effect of superphosphate, urea and bioinoculants on Zinnia elegans Jacq.

Current agricultural practices depend heavily on chemical inputs, and their overuse seriously contaminates the soil health. Microbial bioinoculants are emerging as an effective greener replacement for chemical fertilizers. These bioinoculants are beneficial for plant growth and also diminishes pathogenicity. Here, we explored three microbial inoculants along with commonly used fertilizers, i.e., Superphosphate (SP) and Urea (UR) for their effectiveness on Zinnia elegans Jacq., that has considerable demand in the floral market. The experiment was conducted in three parts with recommended doses of fertilizers, low (half) doses, and high (double) doses in combination with Glomus mosseae (GM), Acaulospora laevis (AL) and Pseudomonas fluorescens (PF), as microbial inoculants. The consortium of microbial inoculants (GM+AL+PF) fed with the low dose of SP and UR gave the best results for growth parameters (Shoot and Root Length, Shoot and Root Weight), Floral traits (floral head number and diameter), mycorrhization pattern and for other physiological attributes (shoot phosphorus content, root phosphorus content, acidic phosphatase, alkaline phosphatase). Overall, the study establishes that microbial bioinoculants is a potential fertilizer supplement at the recommended dose supports optimum Z. elegans growth

Tracing geochemical sources and health risk assessment of uranium in groundwater of arid zone of India

Water quality degradation and metal contamination in groundwater are serious concerns in an arid region with scanty water resources. This study aimed at evaluating the source of uranium (U) and potential health risk assessment in groundwater of the arid region of western Rajasthan and northern Gujarat. The probable source of vanadium (V) and fluorine (F) was also identified. U and trace metal concentration, along with physicochemical characteristics were determined for 265 groundwater samples collected from groundwater of duricrusts and palaeochannels of western Rajasthan and northern Gujarat. The U concentration ranged between 0.6 and 260 μg L−1 with a mean value of 24 μg L−1, and 30% of samples surpassed the World Health Organization’s limit for U (30 μg L−1). Speciation results suggested that dissolution of primary U mineral, carnotite [ K2(UO2)2(VO4)2·3H2O] governs the enrichment. Water–rock interaction and evaporation are found the major hydrogeochemical processes controlling U mineralization. Groundwater zones having high U concentrations are characterized by Na–Cl hydrogeochemical facies and high total dissolved solids. It is inferred from geochemical modelling and principal component analysis that silicate weathering, bicarbonate complexation, carnotite dissolution, and ion exchange are principal factors controlling major solute ion chemistry. The annual ingestion doses of U for all the age groups are found to be safe and below the permissible limit in all samples. The health risk assessment with trace elements manifested high carcinogenic risks for children

Comprehensive survey on nanobiomaterials for bone tissue engineering applications

One of the most important ideas ever produced by the application of materials science to the medical field is the notion of biomaterials. The nanostructured biomaterials play a crucial role in the development of new treatment strategies including not only the replacement of tissues and organs, but also repair and regeneration. They are designed to interact with damaged or injured tissues to induce regeneration, or as a forest for the production of laboratory tissues, so they must be micro-environmentally sensitive. The existing materials have many limitations, including impaired cell attachment, proliferation, and toxicity. Nanotechnology may open new avenues to bone tissue engineering by forming new assemblies similar in size and shape to the existing hierarchical bone structure. Organic and inorganic nanobiomaterials are increasingly used for bone tissue engineering applications because they may allow to overcome some of the current restrictions entailed by bone regeneration methods. This review covers the applications of different organic and inorganic nanobiomaterials in the field of hard tissue engineering

Bioengineered bioreactors: a review on enhancing biomethane and biohydrogen production by CFD modeling

Computational fluid dynamics (CFD) is numerical strategy developed for simulating the behavior of liquid and gas flow. CFD may be applied starting from aerospace, engine design, vehicle aerodynamics, power plants and chemical industries for analyzing and solving relevant system design and process issues. Biogas produced during anaerobic digestion (AD) is sustainable and renewable alternative to fossil fuels. AD may improve the controlled production of biogas and offers significant environmental benefits. This review focuses on research outcomes relevant for enhanced biogas production by exploring the possible applications of CFD in AD technology. CFD-related research performed in AD conditions in order to improve mixing performance, reduce power consumption, and understand the effects of total solid (TS) concentrations on flow behavior have been discussed. In addition, the use of AD for bio-hydrogen production, wastewater treatment, and sludge treatment are looked in. This review also identifies novel areas for AD technology advancement where there is potential for economic improvement in renewable energy production. Finally, future research needs have been identified, focusing on the opportunities to integrate conceptual and mathematical models for advancing CFD simulations for bioenergy

Validation of molecular markers linked to low glucosinolate QTLs for marker assisted selection in Indian mustard (Brassica juncea L. Czern & Coss)

Not AvailableSix earlier reported markers closely linked to low glucosinolate QTLs of Brassica juncea, spread across ‘A’ genome (A2, A3 and A9) were validated in a recombinant inbred line (RIL) population of a cross between Pusa Mustard-21 (low erucic acid) and EC-597325 (double low) genotypes, to utilize them in marker-assisted selection (MAS). Of them, four markers viz., GER 1 amplified alleles of 650 bp and of 950 bp, GER 5 amplified 310 bp and 350 bp, At5gAJ67 amplified 500 bp and 450 bp and Myb28 amplified alleles of size 900 bp and 920 bp in EC597325 and Pusa Mustard-21, respectively and therefore differentiated low and high glucosinolate parents. These four polymorphic markers were then used to genotype the phenotyped RIL population consisting 608 plants. Marker-trait association was tested for goodness of fit using c2 test. Of the four markers, GER1 and GER5 showed higher phenotypic variance (R2 value) compared to the others, indicating their significance in determination of glucosinolates and prospects for use in MAS for development of Indian mustard genotypes with low glucosinolates content.Not Availabl